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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
ATAC-seq
Assay category
12
DNA binding
2
DNA accessibility
Target of assay
12
histone
12
histone modification
8
broad histone mark
4
narrow histone mark
Date released
12
August, 2017
1
March, 2019
1
October, 2017
Available data
689
bam
623
bigWig
471
fastq
417
tsv
214
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bedpe bed3+
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
8
Homo sapiens
Biosample type
14
tissue
Organ
14
pancreas
13
musculature of body
9
brain
1
adipose tissue
1
connective tissue
Project
14
AMP
Genome assembly (visualization)
13
hg19
7
GRCh38
Lab
12
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent assembly
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
14 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
6
2
pancreas
6
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