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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
9
DNase-seq
Assay category
10
DNA binding
9
DNA accessibility
Target of assay
5
transcription factor
3
histone
3
histone modification
2
broad histone mark
2
control
1
RNA binding protein
1
narrow histone mark
Date released
6
February, 2021
6
October, 2019
5
June, 2019
2
November, 2017
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
19
Homo sapiens
Biosample type
8
primary cell
6
cell line
5
tissue
Organ
156
brain
138
liver
78
kidney
48
musculature of body
36
heart
36
limb
31
connective tissue
29
epithelium
28
pancreas
23
vasculature
19
blood vessel
18
ureter
10
adipose tissue
10
artery
4
eye
4
vein
2
nerve
1
pituitary gland
1
spleen
Project
19
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
19
AMP-T2D consortium
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
DNase-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
6
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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