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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
885
ChIP-seq
296
total RNA-seq
207
DNase-seq
141
single cell RNA-seq
84
RNA microarray
64
ATAC-seq
28
snATAC-seq
17
WGBS
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
MPRA
1
pCHi-C
Assay category
141
Transcription
Date released
48
July, 2018
38
April, 2018
22
September, 2020
17
February, 2021
8
August, 2021
3
August, 2018
3
June, 2018
1
November, 2018
1
September, 2018
Available data
205
tsv
128
fastq
100
bam
100
bigWig
52
zippedFastqFolder
13
txt
8
csv
0
bed broadPeak
Organism
141
Homo sapiens
Biosample type
128
primary cell
13
tissue
Organ
69
pancreas
66
epithelium
13
kidney
3
connective tissue
Project
107
AMP
34
HPAP
Genome assembly (visualization)
92
GRCh38
92
hg19
Lab
99
AMP-T2D consortium
34
Klaus Kaestner, Upenn
8
Katalin Susztak, Upenn
Audit category:
7
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
141 results
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single cell RNA-seq
primary cell
Langerhans cell
34
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic acinar cell
9
+ See 12 more…
tissue
kidney
13
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