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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
206
DNase-seq
44
ChIP-seq
2
ATAC-seq
Assay category
44
DNA binding
Target of assay
42
histone
42
histone modification
26
broad histone mark
16
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
November, 2017
39
August, 2017
3
October, 2017
2
October, 2019
Available data
1186
bam
1016
bigWig
972
bed narrowPeak
533
fastq
489
bigBed narrowPeak
320
tagAlign
53
bed bed3+
44
bed broadPeak
15
bigBed broadPeak
1
tagAlign bed3+
Organism
38
Homo sapiens
Biosample type
29
tissue
15
primary cell
Organ
13
musculature of body
12
pancreas
3
brain
2
blood vessel
2
epithelium
2
vasculature
2
vein
1
adipose tissue
1
connective tissue
Project
44
AMP
Genome assembly (visualization)
44
hg19
21
GRCh38
Lab
44
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
2
inconsistent assembly
month_released!
November, 2017
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
6
brain
3
subcutaneous abdominal adipose tissue
1
primary cell
skeletal muscle myoblast
13
endothelial cell of umbilical vein
2
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