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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
DNase-seq
26
ChIP-seq
Assay category
188
DNA accessibility
26
DNA binding
Target of assay
26
histone
26
histone modification
14
broad histone mark
12
narrow histone mark
Date released
187
June, 2019
20
August, 2017
October, 2019
6
November, 2017
1
November, 2020
Available data
3142
bam
2922
bigWig
1588
bed narrowPeak
1584
tsv
fastq
972
bigBed narrowPeak
349
tagAlign
313
bed broadPeak
276
bigBed broadPeak
265
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
vcf
Organism
214
Homo sapiens
Biosample type
189
tissue
25
primary cell
Organ
78
kidney
46
musculature of body
36
brain
32
limb
30
heart
18
ureter
14
epithelium
10
pancreas
8
connective tissue
7
vasculature
5
blood vessel
4
eye
2
adipose tissue
2
artery
2
liver
Project
214
AMP
Genome assembly (visualization)
193
GRCh38
191
hg19
Lab
214
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
October, 2019
files.file_type!
fastq
BIOSAMPLE
ASSAY
214 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
skeletal muscle tissue
13
+ See 40 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 16 more…
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