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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
165
DNase-seq
22
ChIP-seq
Assay category
165
DNA accessibility
22
DNA binding
Target of assay
22
histone
22
histone modification
14
broad histone mark
8
narrow histone mark
Date released
157
June, 2019
20
August, 2017
9
October, 2019
1
November, 2020
Available data
3149
bam
2907
bigWig
1574
bed narrowPeak
1574
tsv
fastq
915
bigBed narrowPeak
280
tagAlign
275
bed broadPeak
247
bigBed broadPeak
238
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
bedpe bed3+
23
hic
11
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
187
Homo sapiens
Biosample type
162
tissue
24
primary cell
1
cell line
Organ
78
kidney
46
musculature of body
brain
36
limb
30
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
11
pancreas
8
connective tissue
4
artery
4
eye
4
vein
2
adipose tissue
2
liver
2
nerve
Project
187
AMP
Genome assembly (visualization)
174
hg19
165
GRCh38
Lab
187
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
brain
files.file_type!
fastq
BIOSAMPLE
ASSAY
187 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
skeletal muscle tissue
13
+ See 26 more…
primary cell
endothelial cell of umbilical vein
2
2
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac muscle cell
1
+ See 12 more…
cell line
Panc1
1
See all biosamples
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