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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
3
ChIP-seq
Assay category
32
DNA accessibility
3
DNA binding
Target of assay
12
histone
histone modification
8
narrow histone mark
4
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
30
June, 2019
3
November, 2017
2
November, 2018
Available data
77
bam
56
bigWig
36
bed narrowPeak
36
bigBed narrowPeak
35
bed bed3+
35
bed broadPeak
35
bigBed broadPeak
tsv
19
tagAlign
11
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
Organism
35
Homo sapiens
Biosample type
27
tissue
8
primary cell
Organ
78
kidney
49
liver
36
limb
35
brain
33
musculature of body
30
heart
18
epithelium
18
ureter
13
vasculature
10
blood vessel
9
connective tissue
9
pancreas
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
35
AMP
Genome assembly (visualization)
35
GRCh38
25
hg19
Lab
35
AMP-T2D consortium
files.file_type!
tsv
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
35 results
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DNase-seq
ChIP-seq
tissue
brain
14
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
astrocyte of the hippocampus
1
brain pericyte
1
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