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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
DNase-seq
28
ChIP-seq
Assay category
65
DNA accessibility
28
DNA binding
Target of assay
25
histone
25
histone modification
13
narrow histone mark
12
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
63
June, 2019
13
August, 2017
12
November, 2017
3
October, 2017
2
November, 2018
Available data
300
bam
290
bigWig
263
bed narrowPeak
174
bigBed narrowPeak
133
tagAlign
93
bed broadPeak
71
bigBed broadPeak
69
bed bed3+
35
tsv
23
fastq
6
bed bedMethyl
6
bigBed bedMethyl
3
hdf5
2
bedpe bed3+
2
hic
1
bed bed3
1
tagAlign bed3+
1
txt
Organism
93
Homo sapiens
Biosample type
81
tissue
12
primary cell
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
93
AMP
Genome assembly (visualization)
83
hg19
79
GRCh38
Lab
93
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
BIOSAMPLE
ASSAY
93 results
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DNase-seq
ChIP-seq
tissue
brain
14
3
muscle of arm
17
muscle of leg
13
skeletal muscle tissue
13
caudate nucleus
1
1
+ See 16 more…
primary cell
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
astrocyte of the hippocampus
1
brain pericyte
1
+ See 1 more…
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