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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
DNase-seq
4
ChIP-seq
Assay category
14
DNA accessibility
4
DNA binding
Target of assay
2
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
14
June, 2019
4
November, 2017
Available data
297
bam
286
bigWig
257
fastq
156
tsv
138
bed narrowPeak
80
zippedFastqFolder
63
bigBed narrowPeak
19
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
4
bedpe bed3+
4
hic
3
cool
2
hdf5
Organism
18
Homo sapiens
Biosample type
18
primary cell
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
vein
3
adipose tissue
2
nerve
1
spleen
Project
18
AMP
Genome assembly (visualization)
18
GRCh38
12
hg19
Lab
18
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vein
BIOSAMPLE
ASSAY
18 results
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DNase-seq
ChIP-seq
primary cell
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
epithelial cell of proximal tubule
1
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