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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
DNase-seq
6
ChIP-seq
Assay category
84
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
82
June, 2019
4
November, 2017
4
October, 2019
Available data
428
bam
402
bigWig
311
bed narrowPeak
257
fastq
172
tsv
163
bigBed narrowPeak
90
bed broadPeak
90
bigBed broadPeak
89
bed bed3+
80
zippedFastqFolder
64
xls
62
txt
7
bed bedMethyl
7
bigBed bedMethyl
7
hic
7
tagAlign
5
bedpe bed3+
5
csv
3
cool
2
hdf5
1
tar
Organism
90
Homo sapiens
Biosample type
68
tissue
22
primary cell
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
90
AMP
Genome assembly (visualization)
88
GRCh38
83
hg19
Lab
90
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
90 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
kidney
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 4 more…
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 8 more…
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