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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
2
ATAC-seq
Assay category
DNA binding
9
DNA accessibility
Date released
4
June, 2019
2
November, 2018
1
March, 2019
1
October, 2017
1
October, 2019
Available data
491
bam
462
bigWig
417
tsv
324
fastq
80
zippedFastqFolder
74
bed narrowPeak
32
bigBed narrowPeak
9
bed broadPeak
8
bed bed3+
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
9
Homo sapiens
Biosample type
8
tissue
1
cell line
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
9
connective tissue
9
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
9
AMP
Genome assembly (visualization)
8
GRCh38
6
hg19
Lab
7
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
9 results
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DNase-seq
ATAC-seq
tissue
body of pancreas
4
islet of Langerhans
2
pancreas
2
cell line
Panc1
1
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