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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
Assay category
69
DNA binding
Target of assay
47
transcription factor
23
histone
23
histone modification
13
narrow histone mark
10
broad histone mark
7
RNA binding protein
4
chromatin remodeller
other context
1
other post-translational modification
Date released
187
June, 2019
69
November, 2017
41
August, 2017
9
November, 2018
9
October, 2019
4
October, 2017
1
March, 2019
1
November, 2020
Available data
390
bam
332
bigWig
322
fastq
311
bed narrowPeak
310
bigBed narrowPeak
78
tagAlign
69
bed broadPeak
63
bigBed broadPeak
3
tar
Organism
69
Homo sapiens
Biosample type
57
cell line
6
primary cell
6
tissue
Organ
57
liver
12
brain
4
epithelium
4
vasculature
2
blood vessel
Project
69
AMP
Genome assembly (visualization)
69
hg19
54
GRCh38
Lab
69
AMP-T2D consortium
Audit category:
13
inconsistent control read length
target.investigated_as!
other context
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
cell line
HepG2
57
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
tissue
cingulate gyrus
2
middle frontal area 46
2
caudate nucleus
1
substantia nigra
1
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