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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
59
histone
59
histone modification
49
transcription factor
32
broad histone mark
27
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
18
August, 2017
10
November, 2017
2
October, 2017
2
October, 2019
Available data
403
bigWig
396
bed narrowPeak
374
bam
238
bigBed narrowPeak
143
tagAlign
114
fastq
32
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
Organism
32
Homo sapiens
Biosample type
16
tissue
8
cell line
8
primary cell
Organ
8
liver
8
musculature of body
4
brain
4
pancreas
2
blood vessel
2
epithelium
2
vasculature
2
vein
Project
32
AMP
Genome assembly (visualization)
32
hg19
17
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
tissue
skeletal muscle tissue
8
islet of Langerhans
4
brain
2
cingulate gyrus
1
middle frontal area 46
1
cell line
HepG2
8
primary cell
skeletal muscle myoblast
6
endothelial cell of umbilical vein
2
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