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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
Assay category
70
DNA binding
Target of assay
65
histone
65
histone modification
49
transcription factor
36
broad histone mark
29
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
38
August, 2017
27
November, 2017
3
October, 2017
2
October, 2019
Available data
869
bigWig
851
bed narrowPeak
820
bam
425
bigBed narrowPeak
321
tagAlign
265
fastq
70
bed broadPeak
35
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
64
Homo sapiens
Biosample type
35
tissue
18
cell line
17
primary cell
Organ
18
liver
13
musculature of body
12
brain
12
pancreas
4
epithelium
4
vasculature
3
blood vessel
2
vein
1
adipose tissue
1
connective tissue
Project
70
AMP
Genome assembly (visualization)
70
hg19
45
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
12
inconsistent control read length
2
inconsistent assembly
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
6
brain
3
cingulate gyrus
2
+ See 4 more…
cell line
HepG2
18
primary cell
skeletal muscle myoblast
12
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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