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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
64
ATAC-seq
8
DNase-seq
2
FAIRE-seq
Assay category
74
DNA accessibility
Date released
20
November, 2019
18
May, 2022
14
September, 2018
5
August, 2017
5
September, 2017
4
June, 2019
4
October, 2017
3
November, 2018
1
October, 2019
Available data
491
bam
462
bigWig
417
tsv
324
fastq
80
zippedFastqFolder
74
bed narrowPeak
32
bigBed narrowPeak
9
bed broadPeak
8
bed bed3+
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
74
Homo sapiens
Biosample type
50
tissue
22
primary cell
2
cell line
Organ
144
kidney
77
heart
74
pancreas
58
vasculature
56
blood vessel
54
epithelium
49
artery
44
limb
33
brain
33
musculature of body
31
eye
28
liver
18
ureter
17
connective tissue
8
bone element
8
skeleton
6
adipose tissue
3
nerve
3
vein
2
spleen
Project
74
AMP
Genome assembly (visualization)
72
hg19
54
GRCh38
Lab
56
AMP-T2D consortium
18
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
37
1
1
body of pancreas
4
4
pancreas
2
1
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cell line
EndoC_BH1
1
Panc1
1
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