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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ATAC-seq
97
ChIP-seq
DNase-seq
Assay category
99
DNA accessibility
97
DNA binding
Target of assay
88
histone
88
histone modification
57
broad histone mark
31
narrow histone mark
9
transcription factor
6
RNA binding protein
3
recombinant protein
Date released
65
August, 2021
54
November, 2017
40
May, 2024
35
February, 2023
2
November, 2018
Available data
371
bam
350
fastq
198
tsv
196
bed narrowPeak
160
tagAlign
157
txt
153
zippedFastqFolder
130
bigWig
64
xls
56
bigBed narrowPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
bed broadPeak
1
hic
1
vcf
Organism
196
Homo sapiens
Biosample type
191
tissue
4
cell line
1
in vitro differentiated cells
Organ
75
heart
64
kidney
52
brain
35
artery
35
blood vessel
35
vasculature
4
liver
Project
196
AMP
Genome assembly (visualization)
1337
GRCh38
hg19
Lab
92
AMP-T2D consortium
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
assay_title!
DNase-seq
award.project!
T1D
assembly!
hg19
BIOSAMPLE
ASSAY
196 results
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ATAC-seq
ChIP-seq
tissue
kidney
64
left cardiac atrium
40
coronary artery
35
layer of hippocampus
16
caudate nucleus
11
+ See 4 more…
cell line
HepG2
4
in vitro differentiated cells
neural progenitor cell
1
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