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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
9
DNase-seq
5
ATAC-seq
Assay category
57
DNA binding
14
DNA accessibility
Target of assay
34
histone
34
histone modification
23
transcription factor
17
narrow histone mark
16
broad histone mark
10
RNA binding protein
2
chromatin remodeller
Date released
45
August, 2017
15
June, 2019
5
October, 2018
2
November, 2020
1
February, 2021
1
November, 2018
1
November, 2019
1
October, 2017
Available data
565
bam
562
bigWig
474
tsv
75
fastq
71
bed narrowPeak
25
bigBed narrowPeak
19
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
Organism
71
Homo sapiens
Biosample type
43
in vitro differentiated cells
17
primary cell
11
tissue
Organ
367
liver
201
brain
188
pancreas
182
kidney
150
heart
138
epithelium
132
vasculature
128
blood vessel
91
limb
74
artery
71
connective tissue
54
blood
54
bodily fluid
46
musculature of body
27
nerve
18
ureter
14
embryo
14
spleen
12
vein
11
adipose tissue
8
bone element
8
skeleton
6
eye
1
pituitary gland
Project
71
AMP
Genome assembly (visualization)
74
hg19
71
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
DNase-seq
ATAC-seq
in vitro differentiated cells
adipocyte
42
1
primary cell
cardiac fibroblast
3
3
mesenchymal stem cell
6
osteoblast
1
2
brain pericyte
1
hepatic stellate cell
1
tissue
omental fat pad
3
2
1
subcutaneous adipose tissue
2
1
adipose tissue
1
adipose tissue(adipose white tissue)
1
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