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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
36
histone
36
histone modification
19
broad histone mark
17
narrow histone mark
11
transcription factor
6
chromatin remodeller
2
RNA binding protein
Date released
32
September, 2018
10
November, 2017
3
October, 2017
2
November, 2018
August, 2017
Available data
50
fastq
49
bam
47
bed narrowPeak
47
bigWig
15
bigBed narrowPeak
4
tagAlign
2
bed broadPeak
Organism
47
Homo sapiens
Biosample type
32
primary cell
12
cell line
3
tissue
Organ
32
pancreas
21
epithelium
12
liver
3
brain
Project
47
AMP
Genome assembly (visualization)
47
hg19
40
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
47
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
month_released!
August, 2017
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
primary cell
pancreatic ductal cell
13
pancreatic endocrine cell
11
pancreatic acinar cell
8
cell line
HepG2
12
tissue
brain
3
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