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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
2
DNase-seq
1
FAIRE-seq
Assay category
31
DNA binding
3
DNA accessibility
Target of assay
30
histone
30
histone modification
20
broad histone mark
10
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
30
May, 2021
3
August, 2017
1
October, 2019
Available data
180
fastq
153
zippedFastqFolder
94
bigWig
84
bam
34
bed narrowPeak
18
tsv
10
bed bedMethyl
10
bigBed bedMethyl
7
bed bed3+
5
hic
4
bed broadPeak
4
bedpe bed3+
4
bigBed broadPeak
4
bigBed narrowPeak
4
hdf5
3
cool
2
csv
2
tagAlign
1
tar
Organism
34
Homo sapiens
Biosample type
101
tissue
46
cell line
34
primary cell
4
in vitro differentiated cells
Organ
1
blood vessel
1
epithelium
1
vasculature
1
vein
Project
34
AMP
Genome assembly (visualization)
288
hg19
GRCh38
Lab
30
Kyle Gaulton, UCSD
4
AMP-T2D consortium
assembly!
GRCh38
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
DNase-seq
FAIRE-seq
primary cell
CD8-positive, alpha-beta T cell
30
skeletal muscle myoblast
1
2
endothelial cell of umbilical vein
1
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