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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
Assay category
23
DNA binding
Target of assay
13
histone
13
histone modification
10
transcription factor
7
narrow histone mark
6
broad histone mark
2
chromatin remodeller
Date released
11
December, 2017
10
August, 2017
2
February, 2018
Available data
56
bam
56
bigWig
56
fastq
54
bed narrowPeak
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
tagAlign
10
bed bed3+
Organism
23
Homo sapiens
Biosample type
17
in vitro differentiated cells
4
primary cell
2
stem cell
Organ
6
connective tissue
5
epithelium
4
pancreas
3
embryo
Project
23
AMP
Genome assembly (visualization)
23
GRCh38
23
hg19
Lab
23
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
23
inconsistent control read length
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
stem cell
hESC
2
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