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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
46
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
71
DNA binding
56
DNA accessibility
Target of assay
64
histone
64
histone modification
41
broad histone mark
23
narrow histone mark
7
transcription factor
3
RNA binding protein
Date released
39
May, 2019
35
February, 2023
34
October, 2019
12
February, 2021
5
June, 2019
2
July, 2019
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
127
Homo sapiens
Biosample type
100
tissue
15
primary cell
12
cell line
Organ
189
brain
183
kidney
151
heart
129
vasculature
127
blood vessel
92
limb
74
artery
74
epithelium
73
liver
69
pancreas
60
musculature of body
33
eye
27
nerve
23
connective tissue
18
ureter
13
vein
8
bone element
8
skeleton
4
adipose tissue
1
pituitary gland
Project
127
AMP
Genome assembly (visualization)
126
GRCh38
91
hg19
Lab
127
AMP-T2D consortium
files.file_type!
fastq
BIOSAMPLE
ASSAY
127 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
4
8
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