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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
17
ATAC-seq
2
FAIRE-seq
Assay category
30
DNA binding
19
DNA accessibility
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
1
RNA binding protein
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
42
August, 2021
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
188
tsv
132
bigWig
131
bam
113
bed narrowPeak
xls
57
txt
24
tagAlign
23
bed bedMethyl
23
bigBed bedMethyl
9
bed bed3+
4
hdf5
2
bedpe bed3+
2
bigBed narrowPeak
2
hic
1
vcf
Organism
49
Homo sapiens
Biosample type
25
in vitro differentiated cells
14
cell line
7
tissue
3
primary cell
Organ
17
liver
4
heart
3
epithelium
2
blood vessel
2
connective tissue
2
vasculature
1
artery
1
brain
1
kidney
Project
49
AMP
Genome assembly (visualization)
48
hg19
31
GRCh38
Lab
33
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
files.file_type!
xls
BIOSAMPLE
ASSAY
49 results
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Clear Filters
ChIP-seq
ATAC-seq
FAIRE-seq
in vitro differentiated cells
neural progenitor cell
13
10
adipocyte
1
osteoblast
1
cell line
HepG2
14
tissue
heart left ventricle
2
coronary artery
1
frontal cortex
1
kidney
1
right atrium auricular region
1
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primary cell
hepatocyte
3
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