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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
45
ATAC-seq
34
ChIP-seq
4
DNase-seq
Assay category
54
Transcription
49
DNA accessibility
34
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
35
February, 2023
26
October, 2019
5
May, 2019
3
July, 2019
2
June, 2019
Available data
102
bam
85
bigWig
74
bed narrowPeak
58
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
137
Homo sapiens
Biosample type
69
tissue
66
cell line
2
primary cell
Organ
715
liver
695
pancreas
597
connective tissue
444
adipose tissue
329
epithelium
247
heart
244
brain
220
vasculature
215
blood vessel
208
kidney
137
artery
114
limb
70
musculature of body
66
bone element
60
blood
60
bodily fluid
42
nerve
36
embryo
34
eye
24
spleen
20
vein
18
ureter
8
skeleton
1
pericardium
1
pituitary gland
Project
137
AMP
Genome assembly (visualization)
128
GRCh38
93
hg19
Lab
137
AMP-T2D consortium
BIOSAMPLE
ASSAY
137 results
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total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
5
2
tibial artery
1
23
2
cell line
smooth muscle cell of the coronary artery
52
8
6
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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