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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
45
ATAC-seq
34
ChIP-seq
2
DNase-seq
Assay category
54
Transcription
47
DNA accessibility
34
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
35
February, 2023
26
October, 2019
5
May, 2019
3
July, 2019
June, 2019
Available data
100
bam
83
bigWig
72
bed narrowPeak
58
tsv
23
bigBed narrowPeak
6
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
135
Homo sapiens
Biosample type
67
tissue
66
cell line
2
primary cell
Organ
713
liver
691
pancreas
579
connective tissue
443
adipose tissue
309
epithelium
252
heart
214
brain
213
vasculature
210
blood vessel
135
artery
127
kidney
82
limb
66
bone element
60
blood
60
bodily fluid
42
nerve
36
embryo
27
eye
27
musculature of body
24
spleen
20
vein
8
skeleton
1
pericardium
1
pituitary gland
Project
135
AMP
Genome assembly (visualization)
126
GRCh38
91
hg19
Lab
135
AMP-T2D consortium
month_released!
June, 2019
BIOSAMPLE
ASSAY
135 results
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total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
5
tibial artery
1
23
2
cell line
smooth muscle cell of the coronary artery
52
8
6
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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