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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ATAC-seq
30
ChIP-seq
15
total RNA-seq
Assay category
76
DNA accessibility
30
DNA binding
15
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
1
RNA binding protein
Date released
568
February, 2021
335
November, 2017
316
May, 2021
272
August, 2017
260
May, 2020
211
October, 2019
210
June, 2019
164
July, 2018
121
August, 2021
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
66
February, 2023
65
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
38
May, 2022
31
February, 2018
30
December, 2018
26
January, 2019
20
March, 2020
14
October, 2017
8
January, 2018
7
August, 2020
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
June, 2018
3
September, 2020
Available data
123
tsv
106
bed narrowPeak
64
xls
57
txt
49
bam
47
bigWig
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
121
Homo sapiens
Biosample type
64
tissue
32
in vitro differentiated cells
22
cell line
3
primary cell
Organ
64
kidney
17
liver
8
embryo
3
epithelium
2
connective tissue
Project
121
AMP
Genome assembly (visualization)
105
GRCh38
56
hg19
Lab
64
Katalin Susztak, Upenn
41
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
121 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
tissue
kidney
64
in vitro differentiated cells
neural progenitor cell
10
13
7
adipocyte
1
osteoblast
1
cell line
HepG2
14
H1-hESC
8
primary cell
hepatocyte
3
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