Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
3
ATAC-seq
2
DNase-seq
Assay category
7
DNA binding
5
DNA accessibility
Target of assay
5
RNA binding protein
5
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
5
October, 2018
3
August, 2017
1
February, 2023
1
June, 2019
1
November, 2018
1
October, 2017
Available data
441
bam
425
bigWig
401
tsv
44
fastq
12
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
0
zippedFastqFolder
Organism
12
Homo sapiens
Biosample type
12
tissue
Organ
440
liver
280
pancreas
209
epithelium
201
brain
187
heart
171
kidney
132
vasculature
129
blood vessel
91
limb
74
artery
64
connective tissue
54
blood
54
bodily fluid
52
musculature of body
33
eye
27
nerve
18
ureter
14
spleen
13
vein
12
adipose tissue
12
embryo
8
bone element
8
skeleton
1
pituitary gland
Project
12
AMP
Genome assembly (visualization)
12
hg19
10
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
12 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
tissue
omental fat pad
3
1
2
subcutaneous adipose tissue
2
1
adipose tissue
1
1
subcutaneous abdominal adipose tissue
1
Download