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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
38
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
69
DNA binding
48
DNA accessibility
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
39
May, 2019
35
February, 2023
34
October, 2019
February, 2021
5
June, 2019
2
July, 2019
2
November, 2017
Available data
117
bed narrowPeak
114
bam
94
bigWig
79
bigBed narrowPeak
16
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
117
Homo sapiens
Biosample type
100
tissue
17
primary cell
Organ
440
liver
214
pancreas
203
brain
183
kidney
151
epithelium
139
heart
121
vasculature
117
blood vessel
86
limb
74
connective tissue
62
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
1
pituitary gland
Project
117
AMP
Genome assembly (visualization)
116
GRCh38
81
hg19
Lab
117
AMP-T2D consortium
month_released!
February, 2021
BIOSAMPLE
ASSAY
117 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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