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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
335
ChIP-seq
Assay category
335
DNA binding
Target of assay
240
transcription factor
76
histone
76
histone modification
66
recombinant protein
46
broad histone mark
35
RNA binding protein
30
narrow histone mark
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
568
February, 2021
335
November, 2017
316
May, 2021
272
August, 2017
260
May, 2020
211
October, 2019
210
June, 2019
164
July, 2018
121
August, 2021
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
66
February, 2023
65
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
38
May, 2022
31
February, 2018
30
December, 2018
26
January, 2019
20
March, 2020
14
October, 2017
8
January, 2018
7
August, 2020
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
June, 2018
3
September, 2020
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
335
Homo sapiens
Biosample type
268
cell line
58
tissue
9
primary cell
Organ
268
liver
67
brain
6
epithelium
6
vasculature
3
blood vessel
Project
335
AMP
Genome assembly (visualization)
281
hg19
280
GRCh38
Lab
335
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
335 results
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Clear Filters
ChIP-seq
cell line
HepG2
268
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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