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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
358
ChIP-seq
Assay category
358
DNA binding
Target of assay
251
transcription factor
104
histone
104
histone modification
66
recombinant protein
64
broad histone mark
46
RNA binding protein
40
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
468
bam
384
fastq
381
bigWig
358
bed narrowPeak
357
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
2
tsv
Organism
358
Homo sapiens
Biosample type
249
cell line
103
tissue
6
primary cell
Organ
249
liver
64
brain
40
pancreas
5
adipose tissue
5
connective tissue
4
epithelium
4
vasculature
2
blood vessel
Project
358
AMP
Genome assembly (visualization)
325
GRCh38
304
hg19
Lab
358
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
20
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
358 results
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Clear Filters
ChIP-seq
cell line
HepG2
249
tissue
body of pancreas
25
layer of hippocampus
16
endocrine pancreas
14
caudate nucleus
12
middle frontal area 46
11
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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