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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ATAC-seq
36
ChIP-seq
Assay category
82
DNA accessibility
36
DNA binding
Target of assay
25
histone
25
histone modification
13
broad histone mark
12
narrow histone mark
11
transcription factor
1
RNA binding protein
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
123
tsv
118
bed narrowPeak
64
bam
64
xls
61
bigWig
57
txt
38
tagAlign
17
fastq
6
bigBed narrowPeak
5
bed bed3+
4
bed broadPeak
2
bedpe bed3+
2
hic
1
vcf
Organism
118
Homo sapiens
Biosample type
76
tissue
25
in vitro differentiated cells
14
cell line
3
primary cell
Organ
64
kidney
17
liver
6
brain
4
pancreas
3
connective tissue
3
epithelium
1
adipose tissue
1
spleen
Project
118
AMP
Genome assembly (visualization)
102
GRCh38
53
hg19
Lab
64
Katalin Susztak, Upenn
38
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
118 results
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Clear Filters
ATAC-seq
ChIP-seq
tissue
kidney
64
brain
6
body of pancreas
4
omental fat pad
1
spleen
1
in vitro differentiated cells
neural progenitor cell
10
13
adipocyte
1
osteoblast
1
cell line
HepG2
14
primary cell
hepatocyte
3
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