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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
46
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
74
DNA binding
56
DNA accessibility
Target of assay
66
histone
66
histone modification
41
broad histone mark
25
narrow histone mark
8
transcription factor
4
RNA binding protein
Date released
39
May, 2019
35
February, 2023
35
October, 2019
12
February, 2021
5
June, 2019
2
July, 2019
2
November, 2017
Available data
181
bam
151
bigWig
130
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
7
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
130
Homo sapiens
Biosample type
101
tissue
17
primary cell
12
cell line
Organ
441
liver
214
pancreas
203
brain
183
kidney
151
epithelium
151
heart
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
130
AMP
Genome assembly (visualization)
129
GRCh38
94
hg19
Lab
130
AMP-T2D consortium
BIOSAMPLE
ASSAY
130 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
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primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
4
8
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