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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ATAC-seq
9
DNase-seq
Assay category
DNA binding
25
DNA accessibility
Date released
9
February, 2021
6
June, 2019
2
August, 2017
2
August, 2021
2
November, 2020
1
February, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
499
bam
495
bigWig
478
tsv
88
txt
25
bed narrowPeak
16
bed bed3+
13
bigBed narrowPeak
11
fastq
10
bed bed3
9
bed broadPeak
9
bigBed broadPeak
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
25
Homo sapiens
Biosample type
14
tissue
8
primary cell
3
in vitro differentiated cells
Organ
144
kidney
77
heart
74
pancreas
58
vasculature
56
blood vessel
54
epithelium
49
artery
44
limb
33
brain
33
musculature of body
31
eye
28
liver
18
ureter
17
connective tissue
8
bone element
8
skeleton
6
adipose tissue
3
nerve
3
vein
2
spleen
Project
25
AMP
Genome assembly (visualization)
24
hg19
22
GRCh38
Lab
23
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
DNase-seq
tissue
omental fat pad
1
2
adipose tissue
1
adipose tissue(adipose white tissue)
1
distal epiphysis
1
distal epiphysis of femur
1
+ See 7 more…
primary cell
cardiac fibroblast
3
osteoblast
2
1
brain pericyte
1
hepatic stellate cell
1
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
See all biosamples
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