Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
32
DNase-seq
1
FAIRE-seq
Assay category
106
DNA binding
33
DNA accessibility
Target of assay
106
histone
106
histone modification
83
narrow histone mark
23
broad histone mark
Date released
75
October, 2019
November, 2017
30
June, 2019
25
May, 2019
6
October, 2017
2
November, 2018
1
July, 2019
Available data
165
bam
156
bigWig
139
bed narrowPeak
64
bigBed narrowPeak
52
tagAlign
35
bed bed3+
35
bed broadPeak
32
bigBed broadPeak
26
tsv
12
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
139
Homo sapiens
Biosample type
134
tissue
5
primary cell
Organ
214
pancreas
192
liver
183
kidney
151
heart
147
epithelium
139
brain
129
vasculature
127
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
139
AMP
Genome assembly (visualization)
138
GRCh38
129
hg19
Lab
139
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
missing controlled_by
month_released!
November, 2017
BIOSAMPLE
ASSAY
139 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
11
14
angular gyrus
14
temporal lobe
13
superior frontal gyrus
4
frontal cortex
2
1
+ See 66 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
See all biosamples
Download