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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
47
ATAC-seq
30
DNase-seq
Assay category
77
DNA accessibility
68
DNA binding
Target of assay
62
histone
62
histone modification
37
broad histone mark
25
narrow histone mark
12
transcription factor
RNA binding protein
Date released
44
April, 2019
35
February, 2023
32
June, 2019
13
May, 2019
12
February, 2021
5
October, 2019
4
July, 2019
Available data
205
bam
178
bigWig
168
tsv
145
bed narrowPeak
88
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
145
Homo sapiens
Biosample type
128
tissue
12
cell line
5
primary cell
Organ
385
liver
206
pancreas
200
brain
181
kidney
145
heart
143
epithelium
128
vasculature
125
blood vessel
92
limb
73
artery
65
connective tissue
60
musculature of body
44
blood
44
bodily fluid
32
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
vein
8
adipose tissue
8
bone element
8
skeleton
1
pituitary gland
Project
145
AMP
Genome assembly (visualization)
144
GRCh38
107
hg19
Lab
145
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
145 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
2
36
2
heart left ventricle
26
2
3
heart
12
18
heart right ventricle
11
1
right atrium auricular region
6
1
2
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cell line
smooth muscle cell of the coronary artery
4
8
primary cell
cardiac fibroblast
2
3
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