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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
278
ChIP-seq
Assay category
278
DNA binding
Target of assay
236
transcription factor
74
histone
74
histone modification
66
recombinant protein
45
broad histone mark
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
278
November, 2017
206
June, 2019
189
October, 2019
135
August, 2017
133
May, 2021
105
August, 2021
92
May, 2019
68
December, 2017
65
February, 2023
62
April, 2019
52
November, 2018
46
September, 2018
38
May, 2022
36
November, 2019
34
October, 2018
28
December, 2018
27
May, 2020
23
February, 2021
16
February, 2018
15
January, 2019
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
355
bam
299
bigWig
287
fastq
278
bed narrowPeak
277
bigBed narrowPeak
78
tagAlign
63
bed broadPeak
57
bigBed broadPeak
2
tar
Organism
278
Homo sapiens
Biosample type
217
cell line
58
tissue
3
primary cell
Organ
217
liver
61
brain
2
epithelium
2
vasculature
1
blood vessel
Project
278
AMP
Genome assembly (visualization)
249
GRCh38
225
hg19
Lab
278
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
14
inconsistent control read length
2
inconsistent control run_type
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
278 results
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Clear Filters
ChIP-seq
cell line
HepG2
217
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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