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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
2
ChIP-seq
2
DNase-seq
Assay category
6
DNA accessibility
2
DNA binding
Target of assay
RNA binding protein
5
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
3
August, 2017
1
February, 2023
1
June, 2019
1
November, 2018
1
November, 2019
1
October, 2017
Available data
437
bam
420
bigWig
401
tsv
39
fastq
8
bed narrowPeak
8
tagAlign
6
bed bed3+
5
bigBed narrowPeak
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
8
Homo sapiens
Biosample type
8
tissue
Organ
385
liver
206
pancreas
200
brain
181
kidney
145
heart
143
epithelium
128
vasculature
125
blood vessel
92
limb
73
artery
65
connective tissue
60
musculature of body
44
blood
44
bodily fluid
32
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
vein
8
adipose tissue
8
bone element
8
skeleton
1
pituitary gland
Project
8
AMP
Genome assembly (visualization)
8
hg19
6
GRCh38
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
8 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
omental fat pad
1
2
adipose tissue
1
1
adipose tissue(adipose white tissue)
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
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