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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
47
ATAC-seq
30
DNase-seq
Assay category
77
DNA accessibility
74
DNA binding
Target of assay
62
histone
62
histone modification
37
broad histone mark
25
narrow histone mark
12
transcription factor
6
RNA binding protein
Date released
47
April, 2019
35
February, 2023
33
June, 2019
15
May, 2019
12
February, 2021
5
October, 2019
4
July, 2019
Available data
211
bam
184
bigWig
168
tsv
151
bed narrowPeak
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
151
Homo sapiens
Biosample type
133
tissue
12
cell line
6
primary cell
Organ
418
liver
214
pancreas
203
brain
183
kidney
151
heart
150
epithelium
133
vasculature
129
blood vessel
92
limb
74
artery
73
connective tissue
60
musculature of body
44
blood
44
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
151
AMP
Genome assembly (visualization)
150
GRCh38
113
hg19
Lab
151
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
151 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
36
2
heart left ventricle
29
2
3
heart
12
18
heart right ventricle
11
1
right atrium auricular region
7
1
2
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cell line
smooth muscle cell of the coronary artery
4
8
primary cell
cardiac fibroblast
3
3
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