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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
5
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
82
DNA binding
10
DNA accessibility
Target of assay
108
histone modification
107
histone
56
broad histone mark
narrow histone mark
24
transcription factor
7
RNA binding protein
3
chromatin remodeller
Date released
284
November, 2017
199
June, 2019
95
August, 2021
92
August, 2017
81
May, 2021
73
November, 2018
72
October, 2019
65
February, 2023
63
May, 2019
57
December, 2017
42
April, 2019
38
May, 2022
34
October, 2018
33
November, 2019
31
September, 2018
30
December, 2018
23
February, 2021
18
January, 2019
11
October, 2017
8
February, 2018
7
July, 2019
5
September, 2017
2
November, 2020
Available data
235
fastq
230
bam
212
bigWig
92
bed narrowPeak
89
tsv
56
tagAlign
30
bigBed narrowPeak
27
bed bed3+
26
bed broadPeak
10
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
88
Homo sapiens
Biosample type
42
tissue
31
in vitro differentiated cells
19
primary cell
Organ
32
connective tissue
29
pancreas
13
liver
9
epithelium
8
musculature of body
1
adipose tissue
Project
92
AMP
Genome assembly (visualization)
92
hg19
76
GRCh38
Lab
92
AMP-T2D consortium
Audit category:
9
inconsistent control read length
2
inconsistent assembly
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
92 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
10
1
1
liver
12
pancreas
8
skeletal muscle tissue
8
right lobe of liver
1
+ See 1 more…
in vitro differentiated cells
adipocyte
30
1
primary cell
skeletal muscle myoblast
8
2
pancreatic alpha cell
3
1
pancreatic beta cell
3
1
pancreatic acinar cell
1
See all biosamples
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