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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
Assay category
17
DNA binding
Target of assay
352
transcription factor
88
recombinant protein
63
RNA binding protein
35
histone
35
histone modification
30
chromatin remodeller
18
narrow histone mark
17
broad histone mark
2
other context
2
other post-translational modification
Date released
7
November, 2017
6
November, 2019
3
October, 2019
1
August, 2021
Available data
18
bam
18
bigWig
17
bed narrowPeak
10
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
8
fastq
6
tagAlign
Organism
17
Homo sapiens
Biosample type
233
tissue
112
primary cell
37
in vitro differentiated cells
17
cell line
1
stem cell
Organ
9
pancreas
8
liver
6
epithelium
Project
17
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
16
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
cell line
HepG2
8
EndoC_BH1
6
Panc1
3
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