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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
Assay category
51
DNA binding
Target of assay
329
transcription factor
81
histone modification
81
recombinant protein
80
histone
56
RNA binding protein
51
narrow histone mark
29
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
27
May, 2020
7
December, 2017
6
November, 2017
5
August, 2017
4
August, 2021
2
October, 2019
Available data
52
bigWig
51
bed narrowPeak
50
bam
40
tagAlign
19
fastq
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
2
bed bed3+
Organism
51
Homo sapiens
Biosample type
36
tissue
8
cell line
5
in vitro differentiated cells
2
primary cell
Organ
105
brain
59
pancreas
51
liver
48
epithelium
40
heart
25
vasculature
24
blood vessel
18
connective tissue
15
kidney
14
limb
11
musculature of body
8
nerve
7
embryo
6
artery
5
vein
2
adipose tissue
2
spleen
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
51
AMP
Genome assembly (visualization)
51
hg19
41
GRCh38
Lab
49
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
files.file_type!
tagAlign bed3+
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ChIP-seq
tissue
liver
34
right lobe of liver
2
cell line
HepG2
8
in vitro differentiated cells
hepatocyte
5
primary cell
hepatocyte
2
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