Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
FAIRE-seq
1
Hi-C
Assay category
1
3D chromatin structure
1
DNA accessibility
Date released
1
March, 2019
1
October, 2019
Available data
2810
bam
2647
bigWig
1481
tsv
1413
bed narrowPeak
931
fastq
687
bigBed narrowPeak
378
tagAlign
270
bed bed3+
263
bed broadPeak
226
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
0
vcf
Organism
2
Homo sapiens
Biosample type
cell line
1
primary cell
1
tissue
Organ
1
blood vessel
1
epithelium
1
pancreas
1
vasculature
1
vein
Project
2
AMP
Genome assembly (visualization)
2
hg19
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
biosample_type!
cell line
BIOSAMPLE
ASSAY
2 results
search-icon
table-tab-icon
Clear Filters
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
1
tissue
islet of Langerhans
1
Download