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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
Hi-C
Assay category
12
3D chromatin structure
Date released
7
March, 2020
2
August, 2021
2
November, 2019
1
October, 2019
Available data
2489
bam
2254
bigWig
1348
bed narrowPeak
1195
tsv
916
bigBed narrowPeak
804
fastq
272
bed broadPeak
258
tagAlign
235
bigBed broadPeak
208
bed bed3+
158
txt
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
13
hic
12
bedpe bed3+
6
bed bed3
6
csv
3
tar
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
12
Homo sapiens
Biosample type
10
tissue
7
in vitro differentiated cells
4
primary cell
2
cell line
Organ
4
pancreas
3
heart
2
liver
2
musculature of body
1
blood vessel
1
epithelium
1
vasculature
Project
12
AMP
Genome assembly (visualization)
11
hg19
Lab
10
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
12 results
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Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 3 more…
cell line
EndoC_BH1
1
HepG2
1
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