Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
Hi-C
3
pCHi-C
Assay category
16
3D chromatin structure
Date released
11
March, 2020
3
October, 2019
October, 2022
2
August, 2021
2
November, 2019
1
August, 2018
Available data
3372
bam
3114
bigWig
1764
bed narrowPeak
1600
tsv
1358
fastq
1029
bigBed narrowPeak
398
tagAlign
318
bed broadPeak
281
bigBed broadPeak
271
bed bed3+
160
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
19
bedpe bed3+
18
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
19
Homo sapiens
Biosample type
10
tissue
7
in vitro differentiated cells
2
cell line
Organ
4
pancreas
3
heart
2
blood vessel
2
epithelium
2
liver
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
vein
Project
19
AMP
Genome assembly (visualization)
17
hg19
Lab
17
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
7
inconsistent ontology term
month_released!
October, 2022
organ_slims!
vein
BIOSAMPLE
ASSAY
19 results
search-icon
table-tab-icon
Clear Filters
Hi-C
pCHi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 3 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
cardiac precursors (cardiac muscle cell)
1
white fat cell
1
cell line
EndoC_BH1
1
HepG2
1
See all biosamples
Download