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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
Hi-C
Assay category
8
3D chromatin structure
Date released
3
October, 2022
2
March, 2020
2
November, 2019
1
August, 2021
Available data
709
bam
638
bigWig
471
fastq
417
tsv
227
bed narrowPeak
104
bigBed narrowPeak
80
zippedFastqFolder
31
bed bed3+
25
bed broadPeak
19
tagAlign
11
bigBed broadPeak
9
hic
8
bedpe bed3+
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
1
tar
Organism
8
Homo sapiens
Biosample type
4
primary cell
3
tissue
1
cell line
Organ
7
pancreas
5
epithelium
3
heart
2
blood vessel
2
liver
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
1
vein
Project
5
AMP
3
HPAP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
3
audit script error
1
inconsistent ontology term
BIOSAMPLE
ASSAY
8 results
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Hi-C
primary cell
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
2
pancreas
1
cell line
EndoC_BH1
1
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