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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ATAC-seq
Assay category
5
DNA accessibility
Date released
3
February, 2023
2
October, 2019
Available data
291
bam
259
bigWig
fastq
132
bed narrowPeak
131
tsv
40
tagAlign
25
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
5
Homo sapiens
Biosample type
591
tissue
66
primary cell
9
cell line
5
in vitro differentiated cells
Organ
2
connective tissue
Project
5
AMP
Genome assembly (visualization)
5
hg19
Lab
3
Struan F.A. Grant, CHOP
2
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
5 results
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ATAC-seq
in vitro differentiated cells
adipocyte
2
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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