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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
4
Hi-C
Assay category
19
DNA methylation
4
3D chromatin structure
Date released
19
July, 2019
4
August, 2017
Available data
433
bam
407
fastq
239
bigWig
200
tsv
185
bed narrowPeak
161
txt
153
zippedFastqFolder
152
tagAlign
44
bigBed narrowPeak
40
bed broadPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
18
bigBed broadPeak
15
bed bed3+
10
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
23
Homo sapiens
Biosample type
14
primary cell
9
tissue
Organ
8
epithelium
5
brain
4
kidney
3
liver
3
musculature of body
3
vasculature
2
blood vessel
2
connective tissue
2
heart
2
pancreas
1
eye
1
pericardium
Project
23
AMP
Genome assembly (visualization)
24
hg19
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
23 results
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RRBS
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 9 more…
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
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