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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
17
WGBS
13
single cell RNA-seq
1
MPRA
Assay category
72
Transcription
17
DNA methylation
Date released
89
February, 2021
57
August, 2021
8
July, 2019
7
November, 2018
6
May, 2022
4
February, 2023
2
August, 2017
1
October, 2022
Available data
394
bam
350
fastq
198
tsv
179
bed narrowPeak
160
tagAlign
157
txt
153
zippedFastqFolder
113
bigWig
79
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
173
Homo sapiens
Biosample type
172
tissue
2
cell line
Organ
88
bone element
62
kidney
10
pancreas
6
heart
4
skeleton
2
adipose tissue
2
connective tissue
2
spleen
1
blood vessel
1
limb
1
liver
1
musculature of body
1
vasculature
Project
174
AMP
Genome assembly (visualization)
hg19
17
GRCh38
Lab
111
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assembly!
hg19
BIOSAMPLE
ASSAY
174 results
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RNA microarray
total RNA-seq
WGBS
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
adipose tissue
2
body of pancreas
2
+ See 12 more…
cell line
HepG2
1
MIN6
1
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