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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
WGBS
14
RRBS
Assay category
30
DNA methylation
Date released
19
July, 2019
7
November, 2018
4
August, 2017
Available data
3132
bam
2877
bigWig
1662
bed narrowPeak
1441
tsv
1345
fastq
979
bigBed narrowPeak
380
tagAlign
273
bed broadPeak
249
bigBed broadPeak
234
bed bed3+
153
zippedFastqFolder
75
txt
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
16
hic
14
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
30
Homo sapiens
Biosample type
22
tissue
7
primary cell
1
cell line
Organ
7
heart
6
pancreas
5
epithelium
musculature of body
3
kidney
3
liver
2
adipose tissue
2
brain
2
connective tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
30
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
30
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
30 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 9 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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