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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
RRBS
16
WGBS
Assay category
32
DNA methylation
Date released
19
July, 2019
7
November, 2018
6
August, 2017
Available data
2996
bam
2783
bigWig
1582
bed narrowPeak
1382
tsv
1341
fastq
936
bigBed narrowPeak
389
tagAlign
302
bed broadPeak
265
bigBed broadPeak
255
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
15
hic
14
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
3
cool
3
hdf5
3
tar
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
32
Homo sapiens
Biosample type
24
tissue
7
primary cell
1
cell line
Organ
7
heart
6
pancreas
5
epithelium
4
musculature of body
3
kidney
3
liver
2
adipose tissue
2
brain
2
connective tissue
2
spleen
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
32
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
32
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
vasculature
BIOSAMPLE
ASSAY
32 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac muscle cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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