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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
19
RRBS
15
WGBS
Assay category
64
DNA accessibility
34
DNA methylation
Date released
64
August, 2021
23
July, 2019
7
November, 2018
4
August, 2017
Available data
2950
bam
2744
bigWig
1804
bed narrowPeak
1314
fastq
1199
tsv
1032
bigBed narrowPeak
390
tagAlign
bed broadPeak
283
bigBed broadPeak
267
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
hic
22
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
98
Homo sapiens
Biosample type
87
tissue
10
primary cell
1
cell line
Organ
68
kidney
8
heart
6
epithelium
6
pancreas
4
musculature of body
3
connective tissue
3
liver
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
98
AMP
Genome assembly (visualization)
79
GRCh38
19
hg19
Lab
64
Katalin Susztak, Upenn
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bed broadPeak
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ATAC-seq
RRBS
WGBS
tissue
kidney
64
1
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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